Aliases : TIR1
Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none
Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00126140 | AFB2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g112625 | AFB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g03539 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene00663.t1 | TIR1, Aspi01Gene00663 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0568.g077530 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01003183001 | TIR1 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18913 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| MA_63733g0010 | COI1 | Coronatine-insensitive protein homolog 1a OS=Oryza... | 0.01 | OrthoFinder output from all 47 species | |
| MA_92309g0010 | TIR1 | component TIR1/AFB of auxin receptor complex. component... | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g26590.1 | COI1 | component COI of jasmonic acid receptor complex | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g02465 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14907 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15130 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26263 | TIR1 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g05861 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013019 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g008780.3.1 | TIR1, Solyc06g008780 | component TIR1/AFB of auxin receptor complex. component... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07433 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06047 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000649_P001 | Zm00001e000649 | component TIR1/AFB of auxin receptor complex. component... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0031369 | translation initiation factor binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0070403 | NAD+ binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |
