Sacu_v1.1_s0011.g004978


Description : not classified & original description: CDS=219-668


Gene families : OG0001512 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001512_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g004978

Target Alias Description ECC score Gene Family Method Actions
AT2G28370 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
Dcu_g14457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016270001 No alias CASP-like protein 5A2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01025194001 No alias CASP-like protein 5A2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01025688001 No alias CASP-like protein 5A1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_10435203g0010 No alias CASP-like protein 5A1 OS=Ginkgo biloba... 0.02 OrthoFinder output from all 47 species
Mp1g18090.1 No alias CASP-like protein 5A1 OS=Ginkgo biloba... 0.02 OrthoFinder output from all 47 species
Msp_g01355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo270224 No alias CASP-like protein 5A1 OS=Selaginella moellendorffii 0.04 OrthoFinder output from all 47 species
Spa_g04778 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 6 134
IPR044822 Myb_DNA-bind_4 84 159
No external refs found!