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  5. Sacu_v1.1_s0011.g004979

Sacu_v1.1_s0011.g004979


Description : not classified & original description: CDS=1-1278


Gene families : OG0000982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g004979
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Adi_g116484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16044.t1 Aspi01Gene16044 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72091.t1 Aspi01Gene72091 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026222001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os03g46350.1 LOC_Os03g46350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g26740.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g21822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017367 No alias not classified & original description: CDS=1-1971 0.03 OrthoFinder output from all 47 species
Zm00001e006592_P002 Zm00001e006592 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 84 159
No external refs found!