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  5. Sacu_v1.1_s0011.g005018

Sacu_v1.1_s0011.g005018


Description : not classified & original description: CDS=1-1431


Gene families : OG0002274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005018
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Adi_g022142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21148.t1 Aspi01Gene21148 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012460 MEE55 not classified & original description: CDS=31-621 0.04 OrthoFinder output from all 47 species
Cba_g14549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17129 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g01530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38431 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48933 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc09g091200.3.1 Solyc09g091200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g29514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007635_P001 Zm00001e007635 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 262 394
IPR005016 TDE1/TMS 59 246
IPR005016 TDE1/TMS 394 473
No external refs found!