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  5. Sacu_v1.1_s0011.g005034

Sacu_v1.1_s0011.g005034


Description : not classified & original description: CDS=1-1650


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005034

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00169780 evm_27.TU.AmTr_v1... Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G57070 No alias Glutaredoxin family protein 0.04 OrthoFinder output from all 47 species
AT5G01420 No alias Glutaredoxin family protein 0.03 OrthoFinder output from all 47 species
AT5G13810 No alias Glutaredoxin family protein 0.03 OrthoFinder output from all 47 species
Adi_g007759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19230 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Ala_g06277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13967.t1 Aspi01Gene13967 actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene31955.t1 Aspi01Gene31955 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38535.t1 Aspi01Gene38535 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0430.g069332 No alias not classified & original description: CDS=1-1461 0.03 OrthoFinder output from all 47 species
Ceric.04G041800.1 Ceric.04G041800 not classified & original description: pacid=50632565... 0.02 OrthoFinder output from all 47 species
Ceric.07G055600.1 Ceric.07G055600 not classified & original description: pacid=50627902... 0.01 OrthoFinder output from all 47 species
Ceric.23G015000.1 Ceric.23G015000 not classified & original description: pacid=50610339... 0.04 OrthoFinder output from all 47 species
Ceric.28G008200.1 Ceric.28G008200 not classified & original description: pacid=50570487... 0.03 OrthoFinder output from all 47 species
Ceric.38G044900.1 Ceric.38G044900 not classified & original description: pacid=50579532... 0.03 OrthoFinder output from all 47 species
Dcu_g07069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14425 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019669001 No alias Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01022568001 No alias Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033855001 No alias Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g07470.1 LOC_Os03g07470 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g03221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_2154g0010 No alias actin filament-bundling factor (THRUMIN) 0.01 OrthoFinder output from all 47 species
Nbi_g08969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c5_15250V3.1 Pp3c5_15250 Glutaredoxin family protein 0.01 OrthoFinder output from all 47 species
Ppi_g05220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61326 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Sam_g09292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g087850.1.1 Solyc02g087850 Uncharacterized protein At3g28850 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g10159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008195_P001 Zm00001e008195 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 348 413
No external refs found!