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  5. Sacu_v1.1_s0011.g005059

Sacu_v1.1_s0011.g005059


Description : not classified & original description: CDS=15-527


Gene families : OG0000369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005059

Target Alias Description ECC score Gene Family Method Actions
Adi_g084015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g11690.1 No alias Protein yippee-like At5g53940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g13690.1 No alias Protein yippee-like At4g27745 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Smo100523 No alias Protein yippee-like At4g27745 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc05g050510.3.1 Solyc05g050510 Protein yippee-like At4g27745 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004347 glucose-6-phosphate isomerase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 13 149
No external refs found!