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  5. Sacu_v1.1_s0011.g005086

Sacu_v1.1_s0011.g005086


Description : substrate adaptor of CUL3-based E3 ubiquitin ligase complex & original description: CDS=173-2053


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005086

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene04013.t1 Aspi01Gene04013 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
LOC_Os09g09370.2 LOC_Os09g09370 BTB/POZ domain-containing protein At5g47800... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0145.g023009 No alias not classified & original description: CDS=496-1932 0.03 OrthoFinder output from all 47 species
Sam_g25277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 218 497
IPR000210 BTB/POZ_dom 28 113
No external refs found!