Sacu_v1.1_s0011.g005117


Description : SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex & original description: CDS=136-1344


Gene families : OG0006179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006179_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005117

Target Alias Description ECC score Gene Family Method Actions
Aop_g69160 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Mp2g15870.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g24929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032048 cardiolipin metabolic process IEP HCCA
BP GO:0032049 cardiolipin biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!