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  5. Sacu_v1.1_s0011.g005257

Sacu_v1.1_s0011.g005257


Description : not classified & original description: CDS=3249-5144


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005257

Target Alias Description ECC score Gene Family Method Actions
Adi_g007759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18844 No alias actin filament-bundling factor *(THRUMIN) & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene54978.t1 Aspi01Gene54978 actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Cba_g02671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04679 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.38G045300.1 Ceric.38G045300 not classified & original description: pacid=50579562... 0.02 OrthoFinder output from all 47 species
Dac_g15917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011378001 No alias Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01024682001 No alias Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g51370.1 LOC_Os02g51370 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g07470.1 LOC_Os03g07470 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g08448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g04860.1 No alias actin filament-bundling factor (THRUMIN) 0.02 OrthoFinder output from all 47 species
Nbi_g07309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36864 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g01039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61326 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Sam_g09292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008195_P001 Zm00001e008195 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e025414_P001 Zm00001e025414 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005299 MeTrfase_7 45 171
IPR002109 Glutaredoxin 483 553
No external refs found!