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  5. Sacu_v1.1_s0012.g005398

Sacu_v1.1_s0012.g005398


Description : not classified & original description: CDS=1-540


Gene families : OG0001159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0012.g005398
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00081p00168190 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00182p00048530 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ala_g19494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21741 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g32679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66341.t1 Aspi01Gene66341 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71508.t1 Aspi01Gene71508 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035831 No alias not classified & original description: CDS=355-885 0.05 OrthoFinder output from all 47 species
Dac_g24850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023260001 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_18731 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45590.1 LOC_Os04g45590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g07940.1 LOC_Os05g07940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7437g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_814986g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g18130.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30062 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g28757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g103590.4.1 Solyc01g103590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g006640.2.1 Solyc12g006640 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035745_P001 Zm00001e035745 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 11 105
No external refs found!