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  5. Sacu_v1.1_s0012.g005508

Sacu_v1.1_s0012.g005508 (ATG18C, ATATG18C)


Aliases : ATG18C, ATATG18C

Description : component *(ATG18) of autophagosome ATG9-2-18 membrane shuttling complex & original description: CDS=1-963


Gene families : OG0000802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0012.g005508
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00210380 AtATG18a,... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.01 OrthoFinder output from all 47 species
Als_g03694 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Als_g04994 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Cba_g11458 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Dac_g15256 ATG18C, ATATG18C component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Mp1g05420.1 AtATG18a component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Mp1g16930.1 AtATG18a component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Sam_g39107 No alias component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Spa_g09790 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Zm00001e025863_P001 ATG18D,... component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 133 158
No external refs found!