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  5. Sacu_v1.1_s0012.g005543

Sacu_v1.1_s0012.g005543


Description : not classified & original description: CDS=1-942


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0012.g005543

Target Alias Description ECC score Gene Family Method Actions
Ala_g01505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50708.t1 Aspi01Gene50708 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g007790.1.1 Solyc09g007790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015167_P001 Zm00001e015167 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 81 313
No external refs found!