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  5. Sacu_v1.1_s0012.g005624

Sacu_v1.1_s0012.g005624


Description : not classified & original description: CDS=567-1340


Gene families : OG0000445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0012.g005624

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00147910 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 3... 0.04 OrthoFinder output from all 47 species
Adi_g021508 CCH not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0168.g054599 No alias not classified & original description: CDS=226-915 0.03 OrthoFinder output from all 47 species
Cba_g03084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22795 FP3, ATFP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26224 FP3, ATFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020240 FP3, ATFP3 not classified & original description: CDS=13-912 0.03 OrthoFinder output from all 47 species
Sam_g19754 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g20074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06889 FP3, ATFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014634_P001 FP3, ATFP3,... Heavy metal-associated isoprenylated plant protein 7... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005047 signal recognition particle binding IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 118 172
IPR006121 HMA_dom 24 80
No external refs found!