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  5. Sacu_v1.1_s0013.g005870

Sacu_v1.1_s0013.g005870


Description : not classified & original description: CDS=1-2601


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0013.g005870

Target Alias Description ECC score Gene Family Method Actions
Adi_g003135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036821 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036834 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g042918 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117068 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09730 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g22656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54924 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23475 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02401.t1 EMB2758, Aspi01Gene02401 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34516.t1 Aspi01Gene34516 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009065 No alias not classified & original description: CDS=1-2421 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g011229 No alias not classified & original description: CDS=1-2535 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012490 No alias not classified & original description: CDS=1-2382 0.04 OrthoFinder output from all 47 species
Azfi_s0014.g013651 No alias not classified & original description: CDS=1-3549 0.04 OrthoFinder output from all 47 species
Azfi_s0021.g015711 No alias not classified & original description: CDS=1-3111 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016118 OTP84 not classified & original description: CDS=1-2007 0.04 OrthoFinder output from all 47 species
Azfi_s0043.g027128 No alias not classified & original description: CDS=146-1684 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g030992 No alias not classified & original description: CDS=1-2877 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033567 EMB2758 not classified & original description: CDS=1-2352 0.04 OrthoFinder output from all 47 species
Azfi_s0068.g036353 No alias not classified & original description: CDS=1-2463 0.03 OrthoFinder output from all 47 species
Azfi_s0175.g055975 No alias not classified & original description: CDS=1-4965 0.03 OrthoFinder output from all 47 species
Azfi_s0197.g057350 No alias not classified & original description: CDS=1-2067 0.03 OrthoFinder output from all 47 species
Azfi_s0235.g059459 OTP86 not classified & original description: CDS=1-2445 0.05 OrthoFinder output from all 47 species
Azfi_s0405.g068373 No alias not classified & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Azfi_s0544.g076391 No alias not classified & original description: CDS=1-906 0.08 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.04 OrthoFinder output from all 47 species
Cba_g19916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20828 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67809 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g77187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77978 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G018600.1 Ceric.01G018600 not classified & original description: pacid=50592052... 0.03 OrthoFinder output from all 47 species
Ceric.01G041400.1 Ceric.01G041400 not classified & original description: pacid=50592429... 0.04 OrthoFinder output from all 47 species
Ceric.01G124700.1 Ceric.01G124700 not classified & original description: pacid=50591887... 0.03 OrthoFinder output from all 47 species
Ceric.02G043000.1 Ceric.02G043000 not classified & original description: pacid=50585529... 0.03 OrthoFinder output from all 47 species
Ceric.02G054200.1 Ceric.02G054200 not classified & original description: pacid=50585961... 0.05 OrthoFinder output from all 47 species
Ceric.04G038000.1 Ceric.04G038000 not classified & original description: pacid=50632532... 0.03 OrthoFinder output from all 47 species
Ceric.07G081900.1 Ceric.07G081900 not classified & original description: pacid=50627936... 0.05 OrthoFinder output from all 47 species
Ceric.07G091600.1 Ceric.07G091600 not classified & original description: pacid=50627346... 0.04 OrthoFinder output from all 47 species
Ceric.11G009800.1 Ceric.11G009800 not classified & original description: pacid=50594985... 0.03 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.03 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.03 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.03 OrthoFinder output from all 47 species
Ceric.17G049800.1 Ceric.17G049800 not classified & original description: pacid=50617439... 0.03 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.03 OrthoFinder output from all 47 species
Ceric.20G086100.1 Ceric.20G086100 not classified & original description: pacid=50566462... 0.04 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.03 OrthoFinder output from all 47 species
Ceric.24G026700.1 Ceric.24G026700 not classified & original description: pacid=50628649... 0.02 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.03 OrthoFinder output from all 47 species
Ceric.25G036300.1 Ceric.25G036300 not classified & original description: pacid=50594016... 0.04 OrthoFinder output from all 47 species
Ceric.27G013400.1 Ceric.27G013400 not classified & original description: pacid=50605328... 0.04 OrthoFinder output from all 47 species
Ceric.30G025400.1 VAC1, ECB2,... not classified & original description: pacid=50608808... 0.04 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.03 OrthoFinder output from all 47 species
Ceric.33G060200.1 Ceric.33G060200 not classified & original description: pacid=50607485... 0.02 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.03 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12890 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21670 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22016 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26090 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36054 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36364 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g41697 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07891 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19012 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21957 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_8499g0030 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Msp_g07558 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g25707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31404 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06160 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14898 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20412 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20508 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32647 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38394 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g42692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13583 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15324 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22251 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g35833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g36012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000500 CRR22 not classified & original description: CDS=1-1614 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003527 EMB2758 not classified & original description: CDS=1-1284 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004530 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2559 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008810 No alias not classified & original description: CDS=1-1683 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015137 No alias not classified & original description: CDS=1-2661 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021986 No alias not classified & original description: CDS=164-3082 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023182 No alias not classified & original description: CDS=1-4812 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023499 No alias not classified & original description: CDS=1-1593 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0237.g026572 No alias not classified & original description: CDS=1-1578 0.04 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g116840.3.1 Solyc03g116840 RNA editing factor (OTP81) 0.03 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30407 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10679 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31666 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 673 697
IPR002885 Pentatricopeptide_repeat 173 191
IPR002885 Pentatricopeptide_repeat 67 90
IPR002885 Pentatricopeptide_repeat 95 125
IPR002885 Pentatricopeptide_repeat 395 441
IPR002885 Pentatricopeptide_repeat 294 341
IPR002885 Pentatricopeptide_repeat 597 644
IPR002885 Pentatricopeptide_repeat 496 543
IPR002885 Pentatricopeptide_repeat 193 240
No external refs found!