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  5. Sacu_v1.1_s0013.g005871

Sacu_v1.1_s0013.g005871


Description : not classified & original description: CDS=88-987


Gene families : OG0002397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0013.g005871
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT5G48205 No alias zinc ion binding 0.02 OrthoFinder output from all 47 species
Ala_g37690 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g40601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00217 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.13G069600.1 Ceric.13G069600 not classified & original description: pacid=50635433... 0.03 OrthoFinder output from all 47 species
LOC_Os09g21710.1 PMZ, SAP12,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc10g080200.2.1 Solyc10g080200 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 13 51
IPR000058 Znf_AN1 101 140
No external refs found!