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  5. Sacu_v1.1_s0013.g005937

Sacu_v1.1_s0013.g005937


Description : not classified & original description: CDS=1-372


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0013.g005937
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT3G48940 No alias Remorin family protein 0.04 OrthoFinder output from all 47 species
Adi_g009108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02159 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g51160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00306 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g50861 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27560.t1 Aspi01Gene27560 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42006.t1 Aspi01Gene42006 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49092.t1 Aspi01Gene49092 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048972 No alias not classified & original description: CDS=564-1205 0.04 OrthoFinder output from all 47 species
Ceric.04G101900.1 Ceric.04G101900 not classified & original description: pacid=50631891... 0.06 OrthoFinder output from all 47 species
Ceric.06G045700.1 Ceric.06G045700 not classified & original description: pacid=50619672... 0.07 OrthoFinder output from all 47 species
Ceric.11G018300.1 Ceric.11G018300 not classified & original description: pacid=50595329... 0.07 OrthoFinder output from all 47 species
Ceric.14G035300.1 Ceric.14G035300 not classified & original description: pacid=50633681... 0.09 OrthoFinder output from all 47 species
Ceric.35G046700.1 Ceric.35G046700 not classified & original description: pacid=50581722... 0.06 OrthoFinder output from all 47 species
Dac_g12729 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g11016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13404 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g42996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48279 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.05 OrthoFinder output from all 47 species
GSVIVT01026869001 No alias Uncharacterized protein At3g61260 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g02040.1 LOC_Os03g02040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g36000.1 LOC_Os10g36000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g01012 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g05082 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g50832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g00941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g00483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07447 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g16515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06776 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g08904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g048820.3.1 Solyc05g048820 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 94.0) 0.02 OrthoFinder output from all 47 species
Spa_g08097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g46489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000088_P001 Zm00001e000088 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 97.1) 0.01 OrthoFinder output from all 47 species
Zm00001e015240_P001 Zm00001e015240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 11 114
No external refs found!