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  5. Sacu_v1.1_s0014.g006110

Sacu_v1.1_s0014.g006110


Description : subfamily ABCG transporter & original description: CDS=1-2232


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006110
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00236610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00060p00208620 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AMTR_s00063p00178530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00075p00150250 evm_27.TU.AmTr_v1... ABC transporter G family member 8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G13610 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT2G37360 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT3G55090 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G55100 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G55110 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT5G19410 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT5G52860 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
Adi_g113805 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23786 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14907 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36964 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05499.t1 Aspi01Gene05499 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0120.g046757 No alias subfamily ABCG transporter & original description: CDS=1-2250 0.04 OrthoFinder output from all 47 species
Cba_g03340 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06245 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g07276 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g17500 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G055400.1 Ceric.14G055400 subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08003 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04073 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25458 WBC19, ATWBC19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06955 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_19188 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Gb_24085 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g42900.1 LOC_Os01g42900 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g61940.1 LOC_Os01g61940 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os06g30730.1 LOC_Os06g30730 subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_529254g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g25240.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Mp2g07990.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Mp5g04860.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Msp_g13417 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39182 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11905 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26296 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32502 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023718 No alias not classified & original description: CDS=1-2514 0.04 OrthoFinder output from all 47 species
Smo84236 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo88976 No alias Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc05g054890.4.1 Solyc05g054890 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc07g053300.1.1 Solyc07g053300 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g10980 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29782 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11561 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44760 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e020697_P001 Zm00001e020697 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e036158_P002 Zm00001e036158 subfamily ABCG transporter 0.08 OrthoFinder output from all 47 species
Zm00001e042020_P001 Zm00001e042020 ABC transporter G family member 5 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 465 673
IPR003439 ABC_transporter-like_ATP-bd 125 277
No external refs found!