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  5. Sacu_v1.1_s0014.g006205

Sacu_v1.1_s0014.g006205


Description : glucuronoxylan 4-O-methyltransferase & original description: CDS=1-879


Gene families : OG0001631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006205
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT3G50220 No alias Protein of unknown function (DUF579) 0.03 OrthoFinder output from all 47 species
AT4G09990 No alias Protein of unknown function (DUF579) 0.02 OrthoFinder output from all 47 species
Aop_g14287 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.33G017200.1 Ceric.33G017200 not classified & original description: pacid=50606579... 0.03 OrthoFinder output from all 47 species
Ceric.38G045400.1 Ceric.38G045400 not classified & original description: pacid=50579776... 0.03 OrthoFinder output from all 47 species
Dcu_g43175 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01004862001 No alias Cell wall.hemicellulose.xylan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01023221001 No alias Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g55640.1 LOC_Os04g55640 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_195978g0010 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g00402 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019581 No alias not classified & original description: CDS=1-867 0.03 OrthoFinder output from all 47 species
Solyc11g031950.1.1 Solyc11g031950 glucuronoxylan 4-O-methyltransferase 0.02 OrthoFinder output from all 47 species
Spa_g24624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16283 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011047_P001 Zm00001e011047 Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e011096_P001 Zm00001e011096 Probable methyltransferase At1g27930 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e013082_P001 Zm00001e013082 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e013688_P001 Zm00001e013688 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e039770_P002 Zm00001e039770 glucuronoxylan 4-O-methyltransferase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 87 274
No external refs found!