Sacu_v1.1_s0014.g006273


Description : not classified & original description: CDS=1-1368


Gene families : OG0000724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000724_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006273

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00038170 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ala_g22803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g42248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38767.t1 Aspi01Gene38767 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036291 No alias not classified & original description: CDS=38-1255 0.04 OrthoFinder output from all 47 species
Dcu_g09036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018208001 No alias No description available 0.02 OrthoFinder output from all 47 species
MA_122248g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_28896g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g090740.3.1 Solyc01g090740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g076010.3.1 Solyc04g076010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e041523_P001 Zm00001e041523 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!