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  5. Sacu_v1.1_s0014.g006320

Sacu_v1.1_s0014.g006320 (AtcpRRF, HFP108, cpRRF, RRF)


Aliases : AtcpRRF, HFP108, cpRRF, RRF

Description : translation ribosome recycling factor *(RRF) & original description: CDS=296-1108


Gene families : OG0006870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006870_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006320
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT3G63190 AtcpRRF, HFP108,... ribosome recycling factor, chloroplast precursor 0.05 OrthoFinder output from all 47 species
Adi_g007469 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Aev_g21988 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Ala_g12791 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Als_g02938 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Cba_g05774 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Ceric.25G011000.1 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Cre03.g156050 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Dac_g03594 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01001148001 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os07g38300.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.07 OrthoFinder output from all 47 species
Len_g47851 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g05872 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Mp5g14000.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.07 OrthoFinder output from all 47 species
Msp_g11460 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g28974 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Ore_g04942 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Pir_g17819 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Pir_g48097 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Pp3c18_6870V3.1 AtcpRRF, HFP108,... ribosome recycling factor, chloroplast precursor 0.03 OrthoFinder output from all 47 species
Ppi_g10744 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Sam_g15107 No alias translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Solyc09g065270.3.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.07 OrthoFinder output from all 47 species
Spa_g44127 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Tin_g00796 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e021862_P002 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.02 OrthoFinder output from all 47 species
Zm00001e029168_P003 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 106 268
No external refs found!