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  5. Sacu_v1.1_s0015.g006456

Sacu_v1.1_s0015.g006456 (ATZIP4, ZIP4)


Aliases : ATZIP4, ZIP4

Description : metal cation transporter *(ZIP) & original description: CDS=59-1300


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0015.g006456
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00045670 ATZIP6, ZIP6,... Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00182180 ATIRT1, IRT1,... Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00184330 ZIP7,... Solute transport.carrier-mediated transport.ZIP... 0.04 OrthoFinder output from all 47 species
Als_g19920 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27419.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0014.g013568 ZIP1 metal cation transporter *(ZIP) & original description: CDS=1-972 0.04 OrthoFinder output from all 47 species
Dac_g35439 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06502 ZIP10 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
LOC_Os03g46454.1 ZIP10, LOC_Os03g46454 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g10940.1 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
LOC_Os06g37010.1 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Len_g45330 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10549 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo231997 ATZIP4, ZIP4 Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
Solyc02g081600.4.1 ZIP1, Solyc02g081600 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Solyc07g043230.3.1 ZIP3, Solyc07g043230 metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 100 410
No external refs found!