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  5. Sacu_v1.1_s0016.g006756

Sacu_v1.1_s0016.g006756 (CRR22)


Aliases : CRR22

Description : not classified & original description: CDS=1-1713


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0016.g006756
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Adi_g019398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15602 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063681 REME1 not classified & original description: CDS=1-1416 0.04 OrthoFinder output from all 47 species
Cba_g34645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G019500.1 Ceric.04G019500 not classified & original description: pacid=50631611... 0.04 OrthoFinder output from all 47 species
Ceric.05G099100.1 OTP86, Ceric.05G099100 not classified & original description: pacid=50578500... 0.04 OrthoFinder output from all 47 species
Ceric.25G022800.1 Ceric.25G022800 not classified & original description: pacid=50594192... 0.06 OrthoFinder output from all 47 species
Dac_g35962 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05938 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g14936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_482767g0010 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
Ore_g12450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17481 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19567 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04516 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g01958 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38609 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 177 202
IPR002885 Pentatricopeptide_repeat 481 506
IPR002885 Pentatricopeptide_repeat 99 126
IPR002885 Pentatricopeptide_repeat 377 403
IPR002885 Pentatricopeptide_repeat 304 351
IPR002885 Pentatricopeptide_repeat 406 451
IPR002885 Pentatricopeptide_repeat 203 250
No external refs found!