Aliases : EMB2261
Description : not classified & original description: CDS=90-2282
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00077p00031710 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g002817 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004392 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004975 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005655 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g008519 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g010601 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g012988 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g015952 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g021432 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g024957 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g025455 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g025630 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034429 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035683 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036585 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036754 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g036757 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036802 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g042866 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g059409 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059925 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086259 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087234 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g097074 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g098198 | SLO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g102645 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104520 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g117996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17004 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17265 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20702 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g25316 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36549 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06415 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09306 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12767 | CRR2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g32799 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g56368 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g60846 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06038 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g06487 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g19060 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g26670 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g26948 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28205 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04175 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g20191 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g38061 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g70560 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene69669.t1 | CRR22, Aspi01Gene69669 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008393 | CRR22 | not classified & original description: CDS=1-1839 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023505 | No alias | not classified & original description: CDS=32-2620 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0059.g034666 | No alias | not classified & original description: CDS=1-1770 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0237.g059606 | No alias | not classified & original description: CDS=1-2121 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0292.g063377 | OTP86 | not classified & original description: CDS=1-2337 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g03409 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06120 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06483 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12399 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g37478 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75325 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G062000.1 | Ceric.10G062000 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G042100.1 | Ceric.25G042100 | not classified & original description: pacid=50593153... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G006800.1 | OTP86, Ceric.27G006800 | not classified & original description: pacid=50605373... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.27G011400.1 | Ceric.27G011400 | not classified & original description: pacid=50605728... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07619 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08084 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g08893 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g26408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g15529 | OTP84 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g21670 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12128 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16282 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g20660 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29669 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021403001 | No alias | Pentatricopeptide repeat-containing protein At3g14730... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03252 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03400 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18031 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22919 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g33480 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g33724 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g44791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g55833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03987 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06746 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07288 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07821 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g08907 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g12162 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g32453 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10433543g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| MA_7907g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.01 | OrthoFinder output from all 47 species | |
| MA_8893194g0010 | MEF1 | RNA editing factor (MEF1) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g03763 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g28761 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04936 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06751 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06768 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g08329 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10208 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g11031 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13990 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20495 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25502 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g29103 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g34904 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02784 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03426 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12401 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g12921 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g58725 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03469 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04547 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07950 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g12786 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g14861 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15168 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g15312 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19353 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23075 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30641 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g17744 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g46526 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g46621 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g57817 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59316 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11848 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18645 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g34646 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37213 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo442088 | CRR22 | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007850.2.1 | Solyc01g007850 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g100340.4.1 | Solyc01g100340 | Pentatricopeptide repeat-containing protein At1g09190... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g025700.2.1 | Solyc03g025700 | OTP70 plastidial RNA splicing factor | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g08133 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08436 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15468 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16563 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21818 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g28927 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g49369 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g50449 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g53488 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54636 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032581_P001 | Zm00001e032581 | RNA editing factor (BLX) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 624 | 647 |
| IPR002885 | Pentatricopeptide_repeat | 419 | 445 |
| IPR002885 | Pentatricopeptide_repeat | 115 | 137 |
| IPR002885 | Pentatricopeptide_repeat | 523 | 547 |
| IPR002885 | Pentatricopeptide_repeat | 140 | 187 |
| IPR002885 | Pentatricopeptide_repeat | 446 | 493 |
| IPR002885 | Pentatricopeptide_repeat | 344 | 391 |
| IPR002885 | Pentatricopeptide_repeat | 549 | 596 |
| IPR002885 | Pentatricopeptide_repeat | 242 | 289 |
| No external refs found! |
