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  5. Sacu_v1.1_s0017.g007107

Sacu_v1.1_s0017.g007107


Description : component *(uS11) of small ribosomal-subunit (SSU) proteome & original description: CDS=310-765


Gene families : OG0001893 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0017.g007107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00104960 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AT2G36160 No alias Ribosomal protein S11 family protein 0.03 OrthoFinder output from all 47 species
AT3G52580 No alias Ribosomal protein S11 family protein 0.04 OrthoFinder output from all 47 species
Aop_g00922 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.44 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Cre11.g480150 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Dac_g08660 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g11136 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01021436001 ATTRANS11, TRANS11 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01033877001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_17066 No alias component RPS14 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os02g33140.1 LOC_Os02g33140 component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_113075g0010 No alias component RPS14 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp8g03250.1 No alias component RPS14 of SSU proteome 0.06 OrthoFinder output from all 47 species
Mp8g10900.1 No alias component RPS14 of SSU proteome 0.05 OrthoFinder output from all 47 species
Pp3c15_22240V3.1 Pp3c15_22240 Ribosomal protein S11 family protein 0.01 OrthoFinder output from all 47 species
Sam_g17417 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g35851 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Solyc09g010100.3.1 Solyc09g010100 component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc10g083280.4.1 Solyc10g083280 component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g10828 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g51819 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e022659_P002 Zm00001e022659 component RPS14 of SSU proteome 0.04 OrthoFinder output from all 47 species
Zm00001e030302_P001 Zm00001e030302 component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e030304_P001 Zm00001e030304 component RPS14 of SSU proteome 0.01 OrthoFinder output from all 47 species
Zm00001e037468_P002 Zm00001e037468 component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 29 147
No external refs found!