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  5. Sacu_v1.1_s0017.g007109

Sacu_v1.1_s0017.g007109


Description : not classified & original description: CDS=1-963


Gene families : OG0001562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0017.g007109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00199710 evm_27.TU.AmTr_v1... Cellular respiration.glycolysis.plastidial... 0.03 OrthoFinder output from all 47 species
Als_g05965 No alias phosphoglycerate mutase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12516 No alias phosphoglycerate mutase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57512.t1 Aspi01Gene57512 phosphoglycerate mutase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g054820.3.1 Solyc04g054820 phosphoglycerate mutase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 173 268
IPR013078 His_Pase_superF_clade-1 39 105
No external refs found!