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  5. Sacu_v1.1_s0017.g007126

Sacu_v1.1_s0017.g007126 (SNF7.2, VPS32)


Aliases : SNF7.2, VPS32

Description : component *(VPS32/SNF7) of ESCRT-III complex & original description: CDS=95-763


Gene families : OG0001125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0017.g007126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00189660 SNF7.1,... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Aop_g02394 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Cba_g76258 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Cre06.g282200 SNF7.2, VPS32 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
LOC_Os12g02830.2 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.01 OrthoFinder output from all 47 species
Msp_g43811 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Nbi_g27598 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Pp3c4_3530V3.1 SNF7.2, VPS32, Pp3c4_3530 SNF7 family protein 0.01 OrthoFinder output from all 47 species
Sam_g13036 No alias component *(VPS32/SNF7) of ESCRT-III complex & original... 0.05 OrthoFinder output from all 47 species
Spa_g05674 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g04422 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e024016_P002 SNF7.1, Zm00001e024016 component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 53 223
No external refs found!