1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0017.g007137

Sacu_v1.1_s0017.g007137


Description : not classified & original description: CDS=193-2466


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0017.g007137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00169780 evm_27.TU.AmTr_v1... Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AMTR_s00031p00132350 evm_27.TU.AmTr_v1... Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00153p00027650 evm_27.TU.AmTr_v1... Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G01420 No alias Glutaredoxin family protein 0.07 OrthoFinder output from all 47 species
AT5G03870 No alias Glutaredoxin family protein 0.03 OrthoFinder output from all 47 species
Aev_g11362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18844 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Aop_g26067 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene13967.t1 Aspi01Gene13967 actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene31955.t1 Aspi01Gene31955 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40722.t1 Aspi01Gene40722 actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Ceric.02G070100.1 Ceric.02G070100 not classified & original description: pacid=50585365... 0.03 OrthoFinder output from all 47 species
Ceric.06G046800.1 Ceric.06G046800 actin filament-bundling factor *(THRUMIN) & original... 0.13 OrthoFinder output from all 47 species
Ceric.23G015000.1 Ceric.23G015000 not classified & original description: pacid=50610339... 0.03 OrthoFinder output from all 47 species
Ceric.35G055600.1 Ceric.35G055600 actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Ceric.38G044900.1 Ceric.38G044900 not classified & original description: pacid=50579532... 0.03 OrthoFinder output from all 47 species
Dac_g28733 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14425 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g09500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033855001 No alias Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os04g33680.1 LOC_Os04g33680 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os07g46570.1 LOC_Os07g46570 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g10410 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g03221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36864 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g05220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g083270.3.1 Solyc08g083270 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc09g009860.1.1 Solyc09g009860 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc11g006430.1.1 Solyc11g006430 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Spa_g10159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40509 No alias actin filament-bundling factor *(THRUMIN) & original... 0.07 OrthoFinder output from all 47 species
Spa_g50389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13659 No alias acTin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Tin_g26880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 595 662
No external refs found!