Aliases : XRN3, AtXRN3
Description : exoribonuclease *(RAT1/XRN2) & original description: none
Gene families : OG0000769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000769_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G54490 | EIN5, AIN1, XRN4, ATXRN4 | exoribonuclease 4 | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g15103 | XRN3, AtXRN3 | exoribonuclease *(RAT1/XRN2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g21055 | XRN3, AtXRN3 | exoribonuclease *(XRN4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g06747 | XRN3, AtXRN3 | exoribonuclease *(XRN4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g11344 | XRN3, AtXRN3 | exoribonuclease *(RAT1/XRN2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0149.g053258 | XRN3, AtXRN3 | exoribonuclease *(RAT1/XRN2) & original description: CDS=205-3336 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G049400.1 | XRN3, AtXRN3,... | exoribonuclease *(RAT1/XRN2) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07777 | XRN3, AtXRN3 | exoribonuclease *(RAT1/XRN2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009879001 | XRN3, AtXRN3 | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021865001 | EIN5, AIN1, XRN4, ATXRN4 | RNA processing.RNA decay.deadenylation-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g19229 | EIN5, AIN1, XRN4, ATXRN4 | exoribonuclease *(XRN4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430844g0010 | XRN3, AtXRN3 | exoribonuclease (RAT1/XRN2) | 0.02 | OrthoFinder output from all 47 species | |
| MA_17503g0010 | XRN3, AtXRN3 | 5-3 exoribonuclease 3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13176 | XRN3, AtXRN3 | exoribonuclease *(RAT1/XRN2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12064 | No alias | exoribonuclease *(RAT1/XRN2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38845 | No alias | exoribonuclease *(XRN4) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Solyc04g081280.3.1 | XRN3, AtXRN3,... | exoribonuclease (RAT1/XRN2) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g089280.2.1 | XRN3, AtXRN3,... | exoribonuclease (RAT1/XRN2) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011879_P001 | EIN5, AIN1,... | EBF-modulating exoribonuclease (EIN5/XRN4).... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0004527 | exonuclease activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0005319 | lipid transporter activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005548 | phospholipid transporter activity | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006869 | lipid transport | IEP | HCCA |
| BP | GO:0007009 | plasma membrane organization | IEP | HCCA |
| BP | GO:0015748 | organophosphate ester transport | IEP | HCCA |
| BP | GO:0015914 | phospholipid transport | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| BP | GO:0017121 | plasma membrane phospholipid scrambling | IEP | HCCA |
| MF | GO:0017128 | phospholipid scramblase activity | IEP | HCCA |
| BP | GO:0034204 | lipid translocation | IEP | HCCA |
| BP | GO:0045332 | phospholipid translocation | IEP | HCCA |
| BP | GO:0061024 | membrane organization | IEP | HCCA |
| BP | GO:0065008 | regulation of biological quality | IEP | HCCA |
| BP | GO:0097035 | regulation of membrane lipid distribution | IEP | HCCA |
| MF | GO:0140303 | intramembrane lipid transporter activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| No external refs found! |
