1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0019.g007655

Sacu_v1.1_s0019.g007655


Description : AHL clade-A transcription factor & original description: CDS=1-843


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0019.g007655
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00017880 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 17... 0.03 OrthoFinder output from all 47 species
AT1G76500 SOB3, AHL29 Predicted AT-hook DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT3G60870 AHL18 AT-hook motif nuclear-localized protein 18 0.02 OrthoFinder output from all 47 species
Adi_g002846 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035569 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055780 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113042 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05839 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14375.t1 Aspi01Gene14375 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69286.t1 AHL22, Aspi01Gene69286 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015426 AHL22 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G024400.1 GIK, Ceric.38G024400 AHL clade-A transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g10273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25287 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027625001 No alias AT-hook motif nuclear-localized protein 22... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72450.1 GIK, LOC_Os01g72450 AT-hook motif nuclear-localized protein 17... 0.02 OrthoFinder output from all 47 species
LOC_Os06g04540.1 LOC_Os06g04540 AT-hook motif nuclear-localized protein 24... 0.02 OrthoFinder output from all 47 species
LOC_Os06g22100.2 AHL22, LOC_Os06g22100 AT-hook motif nuclear-localized protein 24... 0.03 OrthoFinder output from all 47 species
MA_2055g0010 No alias AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
MA_291092g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
MA_77661g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g28100 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14039 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12447 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61776 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005976 No alias AHL clade-A transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Solyc07g056300.1.1 Solyc07g056300 AT-hook motif nuclear-localized protein 16... 0.03 OrthoFinder output from all 47 species
Solyc08g007560.3.1 AHL22, Solyc08g007560 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
Solyc08g079720.3.1 AHL22, Solyc08g079720 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
Tin_g01806 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009975_P001 Zm00001e009975 AT-hook motif nuclear-localized protein 17... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 101 213
No external refs found!