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  5. Sacu_v1.1_s0019.g007665

Sacu_v1.1_s0019.g007665 (TCX2, ATTCX2)


Aliases : TCX2, ATTCX2

Description : TCX/CPP-type transcription factor & original description: CDS=706-3459


Gene families : OG0001700 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001700_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0019.g007665
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Als_g47414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06810 SOL1 TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38475 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
InterPro domains Description Start Stop
IPR005172 CRC 467 492
IPR005172 CRC 543 577
No external refs found!