Sacu_v1.1_s0020.g008095 (TUB6)

Aliases : TUB6

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: CDS=1-1365

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0020.g008095

Target	Alias	Description	ECC score	Gene Family Method
AT5G62690	TUB2	tubulin beta chain 2	0.02	OrthoFinder output from all 47 species
Ala_g16994	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ala_g23454	TUB6	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene15212.t1	TUB6, Aspi01Gene15212	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Aspi01Gene19826.t1	TUB6, Aspi01Gene19826	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Aspi01Gene35906.t1	TUB2, Aspi01Gene35906	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Azfi_s0678.g081838	TUB6	not classified & original description: CDS=1-1224	0.04	OrthoFinder output from all 47 species
Cba_g38007	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Cba_g69323	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ceric.31G054800.1	TUB2, Ceric.31G054800	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dac_g23831	TUB7	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dcu_g06899	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
GSVIVT01019775001	TUB8	Tubulin beta-8 chain OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01025778001	TUB6	Tubulin beta-4 chain OS=Eleusine indica	0.04	OrthoFinder output from all 47 species
Lfl_g05333	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.06	OrthoFinder output from all 47 species
Lfl_g06502	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Msp_g09508	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Nbi_g06968	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ppi_g35826	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ppi_g62362	TUB8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000584	TUB2	not classified & original description: CDS=76-996	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020465	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Smo114265	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Spa_g50619	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Tin_g06951	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Zm00001e000048_P003	TUB2, Zm00001e000048	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Zm00001e039740_P001	TUB9, Zm00001e039740	Tubulin beta-7 chain OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
Zm00001e042329_P001	TUB9, Zm00001e042329	Tubulin beta-7 chain OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003008	Tubulin_FtsZ_GTPase	11	219
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	269	390

External Links

No external refs found!

Sacu_v1.1_s0020.g008095 (TUB6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation