Aliases : OTP86
Description : not classified & original description: CDS=1-2439
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00244370 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g05340... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g004167 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024762 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034926 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067156 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074694 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080646 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101230 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g115360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g41951 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g26992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20359 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g28684 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene45825.t1 | Aspi01Gene45825 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0652.g081079 | No alias | not classified & original description: CDS=1-2169 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03349 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06552 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G075300.1 | Ceric.23G075300 | not classified & original description: pacid=50609898... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g06472 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g16457 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18570 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g45650 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07128 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08450 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38857 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g01734 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05848 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g11652 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g12887 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22174 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g27024 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g28218 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28225 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g46464 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g04950 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g25037 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g58100.1 | OTP85, LOC_Os03g58100 | RNA editing factor (OTP85) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g33840.1 | LOC_Os04g33840 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18534 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44704 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_184088g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_385322g0010 | OTP82 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03167 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g16027 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g32647 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01677 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19172 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g32611 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08864 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13334 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59836 | EMB2758 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004138 | No alias | not classified & original description: CDS=1-2646 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0140.g022718 | No alias | not classified & original description: CDS=1-2991 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g36708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38969 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39629 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23008 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g32428 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015252 | proton channel activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| CC | GO:0070449 | elongin complex | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 394 | 414 |
| IPR002885 | Pentatricopeptide_repeat | 292 | 314 |
| IPR002885 | Pentatricopeptide_repeat | 216 | 262 |
| IPR002885 | Pentatricopeptide_repeat | 113 | 160 |
| IPR002885 | Pentatricopeptide_repeat | 623 | 671 |
| IPR002885 | Pentatricopeptide_repeat | 521 | 568 |
| IPR002885 | Pentatricopeptide_repeat | 317 | 363 |
| IPR002885 | Pentatricopeptide_repeat | 420 | 466 |
| IPR046848 | E_motif | 743 | 787 |
| No external refs found! |
