Sacu_v1.1_s0021.g008259


Description : aminoacyl-tRNA binding factor *(eEF1A)) & original description: CDS=299-1642


Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0021.g008259

Target Alias Description ECC score Gene Family Method Actions
Msp_g06564 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Pir_g30115 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.01 OrthoFinder output from all 47 species
Zm00001e026762_P001 Zm00001e026762 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Zm00001e026763_P003 Zm00001e026763 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Zm00001e031390_P004 Zm00001e031390 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Zm00001e031391_P002 Zm00001e031391 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Zm00001e031407_P001 Zm00001e031407 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 248 313
IPR000795 T_Tr_GTP-bd_dom 5 221
IPR004160 Transl_elong_EFTu/EF1A_C 322 429
No external refs found!