Sacu_v1.1_s0021.g008297


Description : not classified & original description: CDS=1-1491


Gene families : OG0002549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002549_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0021.g008297

Target Alias Description ECC score Gene Family Method Actions
Aob_g23821 No alias regulatory factor *(RP8) of RNA polymerase RpoA activity... 0.03 OrthoFinder output from all 47 species
Ceric.23G023200.1 Ceric.23G023200 not classified & original description: pacid=50611197... 0.04 OrthoFinder output from all 47 species
Cre18.g748397 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01003846001 No alias Uncharacterized protein At4g37920 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g20110.1 LOC_Os01g20110 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g18242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g13740.1 No alias Uncharacterized protein At4g37920 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g10310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029280_P001 Zm00001e029280 Uncharacterized protein At4g37920 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!