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  5. Sacu_v1.1_s0021.g008518

Sacu_v1.1_s0021.g008518


Description : not classified & original description: CDS=1-1671


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0021.g008518
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Ala_g30878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16841 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38925 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.04 OrthoFinder output from all 47 species
Ceric.07G098300.1 CRR22, Ceric.07G098300 not classified & original description: pacid=50626946... 0.04 OrthoFinder output from all 47 species
Ceric.11G067400.1 Ceric.11G067400 not classified & original description: pacid=50595438... 0.03 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.03 OrthoFinder output from all 47 species
Ceric.33G061000.1 OTP84, Ceric.33G061000 not classified & original description: pacid=50606666... 0.04 OrthoFinder output from all 47 species
Dac_g04259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22020 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12939 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13283 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17755 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18579 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16806 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57343 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g20514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004138 No alias not classified & original description: CDS=1-2646 0.04 OrthoFinder output from all 47 species
Sam_g35189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 277 324
IPR002885 Pentatricopeptide_repeat 380 427
IPR002885 Pentatricopeptide_repeat 176 222
IPR002885 Pentatricopeptide_repeat 254 276
IPR002885 Pentatricopeptide_repeat 150 172
IPR002885 Pentatricopeptide_repeat 77 104
IPR002885 Pentatricopeptide_repeat 354 376
IPR002885 Pentatricopeptide_repeat 457 476
No external refs found!