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  5. Sacu_v1.1_s0022.g008667

Sacu_v1.1_s0022.g008667


Description : not classified & original description: CDS=1-402


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0022.g008667
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00104040 evm_27.TU.AmTr_v1... Protein YLS3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00002p00240480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AMTR_s00002p00272110 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT1G62790 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Aev_g42840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12060.t1 Aspi01Gene12060 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene29219.t1 Aspi01Gene29219 arabinogalactan protein *(Xylogen) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33061.t1 Aspi01Gene33061 arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44733.t1 Aspi01Gene44733 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012661 LTPG1 not classified & original description: CDS=60-632 0.04 OrthoFinder output from all 47 species
Ceric.12G092700.1 Ceric.12G092700 not classified & original description: pacid=50601364... 0.05 OrthoFinder output from all 47 species
Ceric.35G030300.1 Ceric.35G030300 not classified & original description: pacid=50581753... 0.03 OrthoFinder output from all 47 species
Dac_g15255 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02508 No alias arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11056 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Gb_01917 No alias classical arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Gb_02441 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_02443 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_02454 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_02458 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_06123 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_06428 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_08579 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_11754 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_24349 No alias xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Gb_28256 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g09230.1 LOC_Os03g09230 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g57970.2 LOC_Os03g57970 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os06g47200.1 LOC_Os06g47200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g07860.1 LOC_Os07g07860 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10069449g0010 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
MA_113140g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_115537g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_1925g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_383975g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
MA_50191g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
MA_64802g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Msp_g06695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04354 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017064 No alias arabinogalactan protein *(Xylogen) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024327 No alias not classified & original description: CDS=1-432 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024328 No alias not classified & original description: CDS=429-857 0.03 OrthoFinder output from all 47 species
Solyc01g073680.4.1 Solyc01g073680 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc03g005210.4.1 Solyc03g005210 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g054030.2.1 Solyc06g054030 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g079250.4.1 Solyc08g079250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g065420.3.1 Solyc09g065420 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g065430.4.1 Solyc09g065430 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g082290.3.1 Solyc09g082290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g072030.3.1 Solyc11g072030 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Spa_g11499 No alias arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Zm00001e005960_P003 EDA4, Zm00001e005960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005961_P001 Zm00001e005961 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e006054_P001 Zm00001e006054 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e010812_P001 Zm00001e010812 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011462_P001 Zm00001e011462 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e011463_P001 Zm00001e011463 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011883_P002 Zm00001e011883 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e028880_P001 Zm00001e028880 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e032912_P001 Zm00001e032912 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038813_P001 Zm00001e038813 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 9 100
No external refs found!