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  5. Sacu_v1.1_s0022.g008708

Sacu_v1.1_s0022.g008708 (WLIM1)


Aliases : WLIM1

Description : LIM-type transcription factor & original description: CDS=250-810


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0022.g008708

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene20213.t2 Aspi01Gene20213 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20782 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23184 WLIM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026849001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 108 162
IPR001781 Znf_LIM 10 64
No external refs found!