Sacu_v1.1_s0023.g008817 (CRR22)


Aliases : CRR22

Description : not classified & original description: CDS=1-2019


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0023.g008817
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00232800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.05 OrthoFinder output from all 47 species
AMTR_s00081p00056740 OTP82,... Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
AMTR_s00129p00082590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g19720... 0.04 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G48910 LPA66 Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g003759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003875 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005655 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015939 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021679 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057083 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066620 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098198 SLO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102645 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06042 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08252 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09708 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18136 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22058 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28718 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68455 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33738.t1 Aspi01Gene33738 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0389.g067649 OTP84 not classified & original description: CDS=1-2388 0.04 OrthoFinder output from all 47 species
Cba_g05760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29689 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29994 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67769 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67848 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G028200.1 OTP84, Ceric.02G028200 not classified & original description: pacid=50583866... 0.03 OrthoFinder output from all 47 species
Ceric.04G072400.1 Ceric.04G072400 not classified & original description: pacid=50630959... 0.04 OrthoFinder output from all 47 species
Ceric.10G062000.1 Ceric.10G062000 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.12G090300.1 Ceric.12G090300 not classified & original description: pacid=50600499... 0.03 OrthoFinder output from all 47 species
Ceric.13G011700.1 Ceric.13G011700 not classified & original description: pacid=50636754... 0.03 OrthoFinder output from all 47 species
Ceric.15G051800.1 VAC1, ECB2,... not classified & original description: pacid=50639747... 0.03 OrthoFinder output from all 47 species
Ceric.16G050700.1 Ceric.16G050700 not classified & original description: pacid=50589143... 0.03 OrthoFinder output from all 47 species
Ceric.17G033700.1 VAC1, ECB2,... not classified & original description: pacid=50617387... 0.03 OrthoFinder output from all 47 species
Ceric.1Z110500.1 Ceric.1Z110500 not classified & original description: pacid=50639205... 0.03 OrthoFinder output from all 47 species
Ceric.21G053500.1 Ceric.21G053500 not classified & original description: pacid=50604142... 0.03 OrthoFinder output from all 47 species
Ceric.23G013400.1 Ceric.23G013400 not classified & original description: pacid=50609831... 0.03 OrthoFinder output from all 47 species
Ceric.26G013000.1 Ceric.26G013000 not classified & original description: pacid=50600010... 0.03 OrthoFinder output from all 47 species
Ceric.26G066800.1 EMB2758, Ceric.26G066800 not classified & original description: pacid=50599100... 0.03 OrthoFinder output from all 47 species
Ceric.31G032400.1 CRR22, Ceric.31G032400 not classified & original description: pacid=50574168... 0.02 OrthoFinder output from all 47 species
Ceric.31G069700.1 CRR21, Ceric.31G069700 not classified & original description: pacid=50574812... 0.03 OrthoFinder output from all 47 species
Ceric.36G051900.1 Ceric.36G051900 not classified & original description: pacid=50568048... 0.03 OrthoFinder output from all 47 species
Ceric.37G053600.1 Ceric.37G053600 not classified & original description: pacid=50616731... 0.03 OrthoFinder output from all 47 species
Dac_g17043 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08294 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19078 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40967 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g43127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42122 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009407001 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
GSVIVT01012159001 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
GSVIVT01014727001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Gb_33335 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
LOC_Os01g68490.1 MEF21, LOC_Os01g68490 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g56400.1 LOC_Os03g56400 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24680.1 LOC_Os09g24680 Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Lfl_g06276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07422 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g33311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10311934g0010 MEF22 Pentatricopeptide repeat-containing protein At1g15510,... 0.04 OrthoFinder output from all 47 species
MA_104937g0010 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
MA_11074g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_141034g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_18165g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_271639g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_3471g0010 OTP84 RNA editing factor (MEF19) 0.03 OrthoFinder output from all 47 species
MA_38266g0010 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
MA_4438g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_525914g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_5481g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_90090g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
Msp_g28724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20604 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22452 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g23628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27965 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38544 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g44663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02390 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12907 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15248 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30175 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57988 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g61389 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22621 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32250 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33169 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo10066 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo90123 OTP84 Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
Solyc01g098150.3.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.04 OrthoFinder output from all 47 species
Solyc09g065840.3.1 OSB1, Solyc09g065840 ssDNA-binding protein (OSB) 0.04 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.03 OrthoFinder output from all 47 species
Solyc12g006575.1.1 OTP82, Solyc12g006575 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Spa_g01950 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g01958 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25939 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30264 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Zm00001e021457_P001 CRR22, Zm00001e021457 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e023498_P001 VAC1, ECB2,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 61 108
IPR002885 Pentatricopeptide_repeat 162 209
IPR002885 Pentatricopeptide_repeat 265 311
IPR002885 Pentatricopeptide_repeat 367 413
IPR002885 Pentatricopeptide_repeat 341 365
IPR002885 Pentatricopeptide_repeat 239 264
IPR032867 DYW_dom 603 671
No external refs found!