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  5. Sacu_v1.1_s0024.g008965

Sacu_v1.1_s0024.g008965


Description : not classified & original description: CDS=1104-2096


Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0024.g008965

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00122220 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00054230 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AT3G08490 No alias BEST Arabidopsis thaliana protein match is: Late... 0.03 OrthoFinder output from all 47 species
AT3G24605 No alias No description available 0.04 OrthoFinder output from all 47 species
Aev_g16993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22107.t1 Aspi01Gene22107 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33549.t1 Aspi01Gene33549 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47789.t1 Aspi01Gene47789 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51693.t1 Aspi01Gene51693 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046456 No alias not classified & original description: CDS=162-1187 0.04 OrthoFinder output from all 47 species
Ceric.01G076700.1 Ceric.01G076700 not classified & original description: pacid=50591443... 0.03 OrthoFinder output from all 47 species
Ceric.24G024200.1 Ceric.24G024200 not classified & original description: pacid=50628716... 0.03 OrthoFinder output from all 47 species
Ceric.31G048500.1 Ceric.31G048500 not classified & original description: pacid=50574815... 0.03 OrthoFinder output from all 47 species
Ceric.33G056400.1 Ceric.33G056400 not classified & original description: pacid=50607285... 0.03 OrthoFinder output from all 47 species
Dde_g00454 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023904001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032090001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00802 No alias microtubule-interacting component CC of cellulose... 0.03 OrthoFinder output from all 47 species
Gb_38619 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g44740.1 LOC_Os02g44740 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g59330.1 LOC_Os04g59330 microtubule-interacting component CC of cellulose... 0.03 OrthoFinder output from all 47 species
Len_g08351 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g05353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10227167g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10436872g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8816169g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g12420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c16_7260V3.1 Pp3c16_7260 Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.01 OrthoFinder output from all 47 species
Ppi_g62547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g087140.4.1 Solyc01g087140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g042880.3.1 Solyc11g042880 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g07963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000854_P001 Zm00001e000854 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e007480_P002 Zm00001e007480 microtubule-interacting component CC of cellulose... 0.04 OrthoFinder output from all 47 species
Zm00001e015379_P001 Zm00001e015379 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030085_P001 Zm00001e030085 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e040882_P001 Zm00001e040882 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 206 306
No external refs found!