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  5. Sacu_v1.1_s0024.g009161

Sacu_v1.1_s0024.g009161


Description : not classified & original description: CDS=1-1362


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0024.g009161
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Aob_g19314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3s62_110V3.1 Pp3s62_110 RNA helicase family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0208.g025850 ESP3, EMB2733 not classified & original description: CDS=1-522 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 238 373
IPR011545 DEAD/DEAH_box_helicase_dom 36 192
No external refs found!