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  5. Sacu_v1.1_s0025.g009330

Sacu_v1.1_s0025.g009330


Description : GRAS-type transcription factor & original description: CDS=1-2118


Gene families : OG0002153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0025.g009330

Target Alias Description ECC score Gene Family Method Actions
Adi_g080255 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Cba_g52782 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Lfl_g04942 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Pir_g16636 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Spa_g12640 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Spa_g22375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10282 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 275 651
No external refs found!