Sacu_v1.1_s0025.g009396 (PDR11, ATPDR11)

Aliases : PDR11, ATPDR11

Description : subfamily ABCG transporter & original description: CDS=1-4197

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0025.g009396
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
Adi_g106367	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g03117	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g20545	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28063.t2	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene36052.t1	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s2025.g108716	PEN3, ABCG36,...	not classified & original description: CDS=1-705	0.03	OrthoFinder output from all 47 species
Cba_g76765	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g24516	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g38790	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g25305	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01017197001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01017200001	ABCG40, PDR12,...	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum	0.03	OrthoFinder output from all 47 species
GSVIVT01017201001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01017202001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Len_g12160	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_117094g0010	ABCG40, PDR12,...	no description available(sp\|h6ws94\|pdr1_pethy : 134.0)	0.02	OrthoFinder output from all 47 species
MA_135152g0010	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Mp4g06670.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Pp3c19_17390V3.1	PDR1, ATPDR1,...	pleiotropic drug resistance 1	0.03	OrthoFinder output from all 47 species
Smo417266	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc08g067620.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Solyc09g091670.3.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Spa_g18419	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g28903	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g45712	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g02910	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e027850_P001	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e030669_P001	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	334	547
IPR013525	ABC_2_trans	1106	1366
IPR003439	ABC_transporter-like_ATP-bd	769	947
IPR013581	PDR_assoc	566	616
IPR043926	ABCG_dom	213	271

External Links

No external refs found!

Sacu_v1.1_s0025.g009396 (PDR11, ATPDR11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation