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  5. Sacu_v1.1_s0027.g009681

Sacu_v1.1_s0027.g009681


Description : not classified & original description: CDS=1-2907


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0027.g009681

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00145640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species
AT3G61170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099164 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g27991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38141 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11484 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g35854 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g15743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39237 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g27283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62402 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene03942.t1 Aspi01Gene03942 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18568.t1 Aspi01Gene18568 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57285.t1 Aspi01Gene57285 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72347.t1 Aspi01Gene72347 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.01 OrthoFinder output from all 47 species
Azfi_s0503.g073910 No alias not classified & original description: CDS=59-2179 0.04 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.01 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.32G057100.1 Ceric.32G057100 not classified & original description: pacid=50598475... 0.03 OrthoFinder output from all 47 species
Dcu_g08450 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g21447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05220 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g11730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g42846 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25136 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003766001 LPA66 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os03g52475.1 LOC_Os03g52475 Pentatricopeptide repeat-containing protein At3g28660... 0.02 OrthoFinder output from all 47 species
Len_g04775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g11858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g43024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54059 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07093 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12137 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32914 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35189 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27836 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30106 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g32582 EMB2261 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g33469 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04335 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63640 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04435 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008413 No alias not classified & original description: CDS=1-1578 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026268 No alias not classified & original description: CDS=1-2328 0.04 OrthoFinder output from all 47 species
Sam_g13764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo126194 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
Smo16626 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species
Spa_g08239 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20273 LPA66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06117 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g17410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 382 429
IPR002885 Pentatricopeptide_repeat 586 633
IPR002885 Pentatricopeptide_repeat 485 531
IPR002885 Pentatricopeptide_repeat 77 124
IPR002885 Pentatricopeptide_repeat 178 225
IPR002885 Pentatricopeptide_repeat 459 481
IPR002885 Pentatricopeptide_repeat 283 310
IPR002885 Pentatricopeptide_repeat 662 687
IPR002885 Pentatricopeptide_repeat 255 278
IPR002885 Pentatricopeptide_repeat 52 74
No external refs found!