Sacu_v1.1_s0028.g009897


Description : not classified & original description: CDS=157-834


Gene families : OG0002035 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0028.g009897

Target Alias Description ECC score Gene Family Method Actions
Aev_g11711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre04.g217910 No alias Rhodanese-like domain-containing protein 14,... 0.02 OrthoFinder output from all 47 species
Dde_g09713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g12160.1 No alias Rhodanese-like domain-containing protein 14,... 0.03 OrthoFinder output from all 47 species
Ppi_g08526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17716 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 79 213
No external refs found!