Description : E3 ubiquitin ligase & original description: CDS=391-1818
Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0028.g009961 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00253970 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00182780 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT3G09760 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Als_g33633 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene69359.t1 | Aspi01Gene69359 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g025874 | No alias | E3 ubiquitin ligase & original description: CDS=290-1723 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G009300.1 | Ceric.15G009300 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16777 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g27849 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g18249 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g30316 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10434983g0010 | No alias | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g19060.1 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g06087 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g044780.3.1 | Solyc07g044780 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g069350.2.1 | Solyc11g069350 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g42112 | No alias | E3 ubiquiTin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e040499_P001 | Zm00001e040499 | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 233 | 280 |
| No external refs found! |
