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  5. Sacu_v1.1_s0029.g010042

Sacu_v1.1_s0029.g010042


Description : not classified & original description: CDS=1-846


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0029.g010042

Target Alias Description ECC score Gene Family Method Actions
AT3G58000 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g36583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38883 No alias WRKY33-activating protein *(SIB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37551.t1 Aspi01Gene37551 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46261.t1 Aspi01Gene46261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G088100.1 Ceric.09G088100 not classified & original description: pacid=50586807... 0.06 OrthoFinder output from all 47 species
Ceric.13G093600.1 Ceric.13G093600 not classified & original description: pacid=50636024... 0.06 OrthoFinder output from all 47 species
Ceric.14G098600.1 Ceric.14G098600 not classified & original description: pacid=50634320... 0.03 OrthoFinder output from all 47 species
Ceric.19G048400.1 Ceric.19G048400 not classified & original description: pacid=50575656... 0.01 OrthoFinder output from all 47 species
Dac_g34502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45144 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001356001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os06g41450.1 LOC_Os06g41450 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g10837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430605g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_2888g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g03890.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g23495 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g34122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0268.g026986 No alias not classified & original description: CDS=193-879 0.04 OrthoFinder output from all 47 species
Sam_g02401 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 60 83
No external refs found!