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  5. Sacu_v1.1_s0030.g010364

Sacu_v1.1_s0030.g010364


Description : component *(ECHIDNA) of trans-Golgi-network (TGN) trafficking complex & original description: CDS=124-666


Gene families : OG0003195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0030.g010364
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00212990 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane... 0.04 OrthoFinder output from all 47 species
Adi_g046374 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Als_g48639 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Aob_g00689 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Aop_g00185 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Cre16.g683250 No alias Vesicle trafficking.endomembrane... 0.02 OrthoFinder output from all 47 species
Dac_g01913 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
GSVIVT01028173001 No alias Vesicle trafficking.endomembrane... 0.02 OrthoFinder output from all 47 species
Len_g00936 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
MA_8217282g0010 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.03 OrthoFinder output from all 47 species
Msp_g19678 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Pir_g00840 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Pnu_g05057 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Pp3c26_11230V3.1 Pp3c26_11230 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c26_12900V3.1 Pp3c26_12900 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c4_27310V3.1 Pp3c4_27310 No annotation 0.04 OrthoFinder output from all 47 species
Spa_g11569 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Tin_g04329 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Zm00001e027476_P002 Zm00001e027476 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0017053 transcription repressor complex IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR008564 TVP23-like 9 148
No external refs found!