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  5. Sacu_v1.1_s0032.g010804

Sacu_v1.1_s0032.g010804


Description : component *(bL34c) of large plastid ribosomal-subunit proteome & original description: CDS=77-493


Gene families : OG0007282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0032.g010804

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00119000 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT1G29070 No alias Ribosomal protein L34 0.09 OrthoFinder output from all 47 species
Aev_g01858 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Azfi_s0700.g082613 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ceric.11G081600.1 Ceric.11G081600 component *(bL34c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cre01.g030050 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
GSVIVT01021193001 No alias Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Gb_28936 No alias component psRPL34 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
LOC_Os01g59060.1 LOC_Os01g59060 component psRPL34 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g11773 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Len_g11774 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g00226 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_10435644g0010 No alias component psRPL34 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Mp1g06530.1 No alias component psRPL34 of large ribosomal subunit proteome 0.14 OrthoFinder output from all 47 species
Msp_g30766 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ore_g14577 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g59944 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Pp3c18_19220V3.1 Pp3c18_19220 Ribosomal protein L34 0.03 OrthoFinder output from all 47 species
Sam_g04499 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc01g056780.3.1 Solyc01g056780 component psRPL34 of large ribosomal subunit proteome 0.09 OrthoFinder output from all 47 species
Spa_g04308 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Spa_g14614 No alias component *(bL34c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Zm00001e019534_P001 Zm00001e019534 component psRPL34 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000271 Ribosomal_L34 92 127
No external refs found!