Sacu_v1.1_s0034.g011237


Description : bHLH-type transcription factor & original description: CDS=1024-1854


Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0034.g011237

Target Alias Description ECC score Gene Family Method Actions
AT3G19500 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G20640 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g030621 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080196 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37882 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14362 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05285 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06030 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28922.t1 Aspi01Gene28922 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0247.g060091 No alias bHLH-type transcription factor & original description: CDS=1-450 0.03 OrthoFinder output from all 47 species
Cba_g33477 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G034500.1 Ceric.32G034500 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g23407 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46632 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18517 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32053 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010280001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01017050001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
LOC_Os01g57580.1 LOC_Os01g57580 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os05g14010.1 LOC_Os05g14010 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp2g19970.1 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Nbi_g04901 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45099 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079760.3.1 Solyc02g079760 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc03g120530.3.1 Solyc03g120530 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc07g020960.3.1 Solyc07g020960 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e010350_P001 Zm00001e010350 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e025623_P002 Zm00001e025623 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA

No InterPro domains available for this sequence

No external refs found!