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  5. Sacu_v1.1_s0036.g011533

Sacu_v1.1_s0036.g011533 (ALS1, ATTAP2, TAP2)


Aliases : ALS1, ATTAP2, TAP2

Description : subfamily ABCB transporter & original description: CDS=173-2104


Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011533

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021434.18 ATTAP1, TAP1 ABC transporter B family member 14 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 117 392
IPR003439 ABC_transporter-like_ATP-bd 461 611
No external refs found!